Looking a FISH keystoning and smile

Mark sent a XLS spread sheet which showed a model of the keystoning of the FISH (current and revised) and wanted to compare the modeled to the real data. So I have plotted the modeled data from the XLSX spread sheet first 4 graphs. One worksheet for the revised data and the other of the current system. To look at the keystoning I used a FISH file looking at the OL420 data. The figure 5 shows the data and. figure 6 shows where the track edges are. Figure 7 shows the right and left edges of the tracks subtracted to get the width. Figure 8 shows the right and left edges sutracted from a straight center line. Figure 9 shows the right and left side of the tracks as millimeter from the center. And finally a table below tries to replicate the XLSX spreadsheet.

Carol Keystoning and Smile explaination Document (PDF)
Mike's BSG Keystoning model (XLSX)

This is the modeled keystoning for the revised system. I have converted the millimeters to pixels assuming that the CCD array is 13.3mm and there are 1024 pixels.

Figure 1

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This is the modeled keystoning for the current system. I have converted the millimeters to pixels assuming that the CCD array is 13.3mm and there are 1024 pixels.

Figure 2

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THis is the percent difference between the revised and current system

THis is the difference in pixels between the revised and current system

Figure 3

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Figure 4

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This is the image I am using. It was before the long fibers and water mirrors were attached and shows all the tracks. The white lines are where I decided the edge of the track are. Rather than picking the peaks of the track I picked the place where the track starts down near the darks. I got these positions by clicking by hand through the data to find the edges. I then interpoated the data to fill in the missing pixels. I them plotted the result in the image below to make sure it worked. Looks pretty good.

Figure 5

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This show the result of the hand selected track edges and interpolation of the data. The Smile seems pretty obvious on this graph. The dashed line down the center is a straight center line which was subtracted from the left and right edges to create Figure 6

Figure 6

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This is the width of the tracks (left side - right). Note that the data from both sides contain keystoning and smile. Not sure how to pull one from the other. Also could some of the track just be wider to start with. The "dark" strip varies quit a bit.

Figure 7

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This is the right and left sides subtracted from the straight center line for each track.

Figure 8

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This is the right and left sides in millimeters from the center.

Figure 9

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This is the right and left sides in millimeters from the center (graphical version of Figure 9). The wavelength is the closest value to the wavelengths in the XLSX file. The table has the millimeters from the center of array for each track. This will be a little different from the table because I have data on both sides of the center and teh XLSX spreadsheet has it for only one side of the array.

TABLE FOR LEFT SIDE OF TRACK
Millimeters from the center of the array (pixel 512) for the left (top) side of each track
Wavlength (nm) T1 T2 T3 T4 T5 T6 Center T7 T8 T9 T10 T11 T12 T13
372.38 -5.0852 -4.0674 -3.1007 -2.1734 -1.2720 -0.4397 0 0.3941 1.2073 2.0579 2.8886 3.7478 4.6990 5.7042
379.93 -5.0926 -4.0744 -3.1068 -2.1771 -1.2747 -0.4412 0 0.3931 1.2083 2.0608 2.8935 3.7549 4.7071 5.7155
389.89 -5.1021 -4.0834 -3.1147 -2.1818 -1.2781 -0.4430 0 0.3918 1.2095 2.0646 2.8996 3.7640 4.7174 5.7299
399.87 -5.1114 -4.0921 -3.1223 -2.1865 -1.2815 -0.4448 0 0.3906 1.2107 2.0682 2.9056 3.7727 4.7274 5.7438
409.87 -5.1204 -4.1006 -3.1297 -2.1910 -1.2847 -0.4466 0 0.3895 1.2119 2.0718 2.9114 3.7811 4.7370 5.7571
419.89 -5.1291 -4.1088 -3.1368 -2.1954 -1.2879 -0.4483 0 0.3884 1.2130 2.0752 2.9169 3.7892 4.7462 5.7699
429.92 -5.1375 -4.1168 -3.1438 -2.1997 -1.2909 -0.4500 0 0.3873 1.2141 2.0785 2.9222 3.7970 4.7550 5.7822
439.98 -5.1457 -4.1245 -3.1505 -2.2038 -1.2939 -0.4517 0 0.3864 1.2151 2.0816 2.9274 3.8044 4.7635 5.7938
450.05 -5.1536 -4.1320 -3.1570 -2.2079 -1.2967 -0.4533 0 0.3855 1.2161 2.0847 2.9323 3.8115 4.7717 5.8050
460.14 -5.1612 -4.1393 -3.1633 -2.2118 -1.2995 -0.4549 0 0.3846 1.2171 2.0876 2.9370 3.8183 4.7794 5.8156
469.90 -5.1683 -4.1460 -3.1691 -2.2155 -1.3021 -0.4564 0 0.3839 1.2180 2.0903 2.9413 3.8245 4.7866 5.8253
480.03 -5.1754 -4.1528 -3.1750 -2.2192 -1.3046 -0.4579 0 0.3832 1.2189 2.0930 2.9456 3.8306 4.7936 5.8348
490.17 -5.1822 -4.1593 -3.1806 -2.2227 -1.3071 -0.4594 0 0.3825 1.2197 2.0956 2.9497 3.8364 4.8003 5.8438
499.99 -5.1886 -4.1654 -3.1858 -2.2261 -1.3093 -0.4608 0 0.3819 1.2205 2.0979 2.9534 3.8417 4.8064 5.8520
510.17 -5.1948 -4.1714 -3.1910 -2.2294 -1.3116 -0.4622 0 0.3814 1.2213 2.1002 2.9571 3.8468 4.8124 5.8599
520.02 -5.2006 -4.1770 -3.1958 -2.2325 -1.3137 -0.4635 0 0.3809 1.2220 2.1024 2.9605 3.8514 4.8178 5.8670
529.88 -5.2062 -4.1823 -3.2004 -2.2355 -1.3156 -0.4648 0 0.3805 1.2227 2.1044 2.9636 3.8558 4.8229 5.8736
540.12 -5.2117 -4.1876 -3.2049 -2.2384 -1.3176 -0.4661 0 0.3801 1.2234 2.1064 2.9666 3.8599 4.8278 5.8800
550.02 -5.2167 -4.1925 -3.2091 -2.2412 -1.3194 -0.4673 0 0.3798 1.2240 2.1082 2.9694 3.8636 4.8321 5.8855
559.94 -5.2215 -4.1971 -3.2131 -2.2439 -1.3211 -0.4685 0 0.3796 1.2246 2.1099 2.9719 3.8670 4.8362 5.8906
569.87 -5.2260 -4.2015 -3.2168 -2.2464 -1.3227 -0.4696 0 0.3794 1.2252 2.1114 2.9743 3.8701 4.8399 5.8952
580.18 -5.2305 -4.2059 -3.2205 -2.2489 -1.3243 -0.4708 0 0.3793 1.2257 2.1129 2.9765 3.8730 4.8434 5.8994
590.15 -5.2345 -4.2098 -3.2239 -2.2512 -1.3257 -0.4719 0 0.3792 1.2262 2.1143 2.9785 3.8755 4.8464 5.9029
600.13 -5.2382 -4.2135 -3.2270 -2.2534 -1.3270 -0.4729 0 0.3792 1.2267 2.1155 2.9802 3.8776 4.8490 5.9059
610.14 -5.2417 -4.2170 -3.2299 -2.2555 -1.3282 -0.4739 0 0.3793 1.2271 2.1166 2.9818 3.8795 4.8514 5.9084
620.16 -5.2450 -4.2203 -3.2326 -2.2575 -1.3294 -0.4749 0 0.3794 1.2275 2.1176 2.9832 3.8810 4.8534 5.9104
629.84 -5.2479 -4.2232 -3.2351 -2.2593 -1.3304 -0.4758 0 0.3795 1.2278 2.1185 2.9843 3.8822 4.8550 5.9119
639.89 -5.2506 -4.2260 -3.2374 -2.2610 -1.3313 -0.4767 0 0.3797 1.2281 2.1193 2.9853 3.8831 4.8563 5.9129
649.96 -5.2531 -4.2285 -3.2395 -2.2627 -1.3322 -0.4775 0 0.3800 1.2284 2.1199 2.9861 3.8838 4.8573 5.9134
660.05 -5.2554 -4.2309 -3.2414 -2.2642 -1.3329 -0.4784 0 0.3803 1.2286 2.1205 2.9867 3.8841 4.8579 5.9134
670.16 -5.2574 -4.2330 -3.2431 -2.2656 -1.3336 -0.4792 0 0.3807 1.2289 2.1209 2.9871 3.8841 4.8582 5.9128
679.92 -5.2590 -4.2348 -3.2445 -2.2669 -1.3342 -0.4799 0 0.3811 1.2290 2.1213 2.9873 3.8838 4.8582 5.9119
690.06 -5.2605 -4.2364 -3.2458 -2.2681 -1.3346 -0.4806 0 0.3816 1.2292 2.1215 2.9873 3.8832 4.8578 5.9103
699.85 -5.2617 -4.2378 -3.2468 -2.2691 -1.3350 -0.4813 0 0.3822 1.2293 2.1216 2.9871 3.8823 4.8572 5.9084
710.02 -5.2627 -4.2390 -3.2477 -2.2701 -1.3353 -0.4819 0 0.3828 1.2293 2.1216 2.9867 3.8811 4.8561 5.9059
719.85 -5.2635 -4.2399 -3.2484 -2.2709 -1.3355 -0.4825 0 0.3834 1.2294 2.1215 2.9862 3.8797 4.8548 5.9030
Min -5.2641 -4.2409 -3.2490 -2.2720 -1.3357 -0.4834 0.3792 0 1.2073 2.0579 2.8886 3.7478 4.6990 5.7042
Max -5.0852 -4.0674 -3.1007 -2.1734 -1.2720 -0.4397 0.3941 0 1.2294 2.1216 2.9873 3.8841 4.8582 5.9134
peak-to-peak keystone (mm) 0.1789 0.1735 0.1483 0.0986 0.0637 0.0436 0.0149 0 0.0221 0.0637 0.0987 0.1364 0.1592 0.2092

TABLE FOR RIGHT SIDE OF TRACK
Millimeters from the center of the array (pixel 512) for the right (bottom) side of each track
Wavlength (nm) T1 T2 T3 T4 T5 T6 T7 Center T8 T9 T10 T11 T12 T13
372.38 -5.9911 -4.9304 -3.9239 -3.0037 -2.0016 -1.2017 -0.4026 0 0.4286 1.3657 2.1109 2.9551 4.0485 4.7572
379.93 -6.0141 -4.9467 -3.9384 -2.9924 -2.0161 -1.2074 -0.4026 0 0.4286 1.3399 2.1166 2.9608 3.9916 4.7802
389.89 -6.0436 -4.9758 -3.9588 -2.9864 -2.0365 -1.2149 -0.4026 0 0.4286 1.3135 2.1241 2.9683 3.9435 4.8098
399.87 -6.0709 -5.0066 -3.9782 -2.9882 -2.0560 -1.2225 -0.4026 0 0.4286 1.2959 2.1316 2.9759 3.9189 4.8370
409.87 -6.0944 -5.0314 -3.9943 -2.9954 -2.0720 -1.2300 -0.4026 0 0.4286 1.2870 2.1392 2.9834 3.9102 4.8605
419.89 -6.1125 -5.0438 -4.0044 -3.0068 -2.0831 -1.2383 -0.4051 0 0.4286 1.2883 2.1474 2.9909 3.9135 4.8791
429.92 -6.1269 -5.0503 -4.0112 -3.0234 -2.0907 -1.2464 -0.4149 0 0.4286 1.2981 2.1556 2.9985 3.9323 4.8939
439.98 -6.1428 -5.0636 -4.0246 -3.0326 -2.0911 -1.2469 -0.4156 0 0.4286 1.2988 2.1561 3.0074 3.9418 4.9029
450.05 -6.1568 -5.0788 -4.0397 -3.0395 -2.0911 -1.2469 -0.4156 0 0.4286 1.2988 2.1561 3.0133 3.9487 4.9098
460.14 -6.1665 -5.0866 -4.0476 -3.0471 -2.0977 -1.2553 -0.4156 0 0.4202 1.2988 2.1645 3.0133 3.9581 4.9174
469.90 -6.1694 -5.0935 -4.0544 -3.0546 -2.1065 -1.2599 -0.4165 0 0.4156 1.2988 2.1682 3.0133 3.9614 4.9249
480.03 -6.1694 -5.1010 -4.0620 -3.0637 -2.1156 -1.2599 -0.4264 0 0.4156 1.2988 2.1582 3.0133 3.9614 4.9340
490.17 -6.1745 -5.1086 -4.0695 -3.0652 -2.1171 -1.2599 -0.4255 0 0.4188 1.3020 2.1592 3.0164 3.9646 4.9355
499.99 -6.1928 -5.1158 -4.0768 -3.0652 -2.1171 -1.2599 -0.4161 0 0.4281 1.3113 2.1685 3.0258 3.9739 4.9355
510.17 -6.2020 -5.1234 -4.0843 -3.0695 -2.1213 -1.2656 -0.4213 0 0.4286 1.3118 2.1690 3.0263 3.9744 4.9355
520.02 -6.2087 -5.1306 -4.0916 -3.0785 -2.1303 -1.2729 -0.4286 0 0.4286 1.3118 2.1691 3.0263 3.9744 4.9356
529.88 -6.2159 -5.1379 -4.1007 -3.0876 -2.1394 -1.2729 -0.4286 0 0.4286 1.3118 2.1771 3.0343 3.9825 4.9516
540.12 -6.2237 -5.1454 -4.1043 -3.0912 -2.1431 -1.2729 -0.4286 0 0.4277 1.3118 2.1820 3.0393 3.9874 4.9606
550.02 -6.2326 -5.1527 -4.1043 -3.0912 -2.1431 -1.2729 -0.4286 0 0.4181 1.3118 2.1820 3.0393 3.9874 4.9510
559.94 -6.2344 -5.1607 -4.1068 -3.0912 -2.1431 -1.2729 -0.4286 0 0.4181 1.3118 2.1820 3.0393 3.9874 4.9510
569.87 -6.2344 -5.1687 -4.1164 -3.0912 -2.1431 -1.2729 -0.4286 0 0.4277 1.3118 2.1820 3.0393 3.9874 4.9606
580.18 -6.2393 -5.1693 -4.1173 -3.0962 -2.1431 -1.2778 -0.4286 0 0.4237 1.3118 2.1820 3.0442 3.9924 4.9615
590.15 -6.2473 -5.1693 -4.1173 -3.1042 -2.1431 -1.2858 -0.4286 0 0.4156 1.3118 2.1820 3.0522 4.0004 4.9615
600.13 -6.2474 -5.1766 -4.1173 -3.1042 -2.1503 -1.2858 -0.4286 0 0.4229 1.3118 2.1820 3.0522 4.0004 4.9688
610.14 -6.2477 -5.1823 -4.1176 -3.1042 -2.1557 -1.2858 -0.4290 0 0.4282 1.3118 2.1820 3.0522 4.0004 4.9745
620.16 -6.2569 -5.1823 -4.1268 -3.1042 -2.1465 -1.2858 -0.4381 0 0.4191 1.3118 2.1820 3.0522 4.0004 4.9745
629.84 -6.2604 -5.1823 -4.1303 -3.1042 -2.1444 -1.2858 -0.4403 0 0.4170 1.3118 2.1820 3.0522 4.0017 4.9759
639.89 -6.2604 -5.1823 -4.1303 -3.1042 -2.1542 -1.2858 -0.4305 0 0.4267 1.3118 2.1820 3.0522 4.0115 4.9856
649.96 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4318 0 0.4255 1.3118 2.1820 3.0522 4.0134 4.9875
660.05 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4411 0 0.4161 1.3118 2.1820 3.0522 4.0134 4.9875
670.16 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1874 3.0576 4.0134 4.9919
679.92 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1950 3.0652 4.0134 5.0003
690.06 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1948 3.0652 4.0146 5.0052
699.85 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1930 3.0652 4.0177 5.0092
710.02 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1879 3.0652 4.0226 5.0123
719.85 -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.3118 2.1782 3.0652 4.0283 5.0138
Min -6.2604 -5.1823 -4.1303 -3.1042 -2.1561 -1.2858 -0.4416 0 0.4156 1.2858 2.1109 2.9551 3.9095 4.7572
Max -5.9911 -4.9304 -3.9239 -2.9862 -2.0016 -1.2017 -0.4026 0 0.4286 1.3657 2.1950 3.0652 4.0485 5.0138
peak-to-peak keystone (mm) 0.2693 0.2519 0.2064 0.1180 0.1544 0.0842 0.0390 0 0.0130 0.0799 0.0842 0.1101 0.1390 0.2566

pwd: G:\zflora\mldata\MOBY2\20120903_shadowing\Resonon\20120908_OL420
Date: 07-Jun-2013 16:03:30
Created from plt_check_keystoning_w_model_(1)