plt_linearity3_

REVISION DATE: 11-Feb-2013 14:02:03

So Mike redid the linearity data. In this setup Mike used a sphere which allowed the use of a bare fiber "Lu" collector, which has a much larger responsivity than Es. This allows higher light levels and shorted integration times (~ 1 sec). He also took 2dk/5lt/2k giving us more stable data. THis data set looks really nice! Very clean. I processed the data the same way I did the previous linearity data. Below is the description of the process used to calculate the linearity for this data set.

Using Carol's linearity write up and after talking to Carol to make sure I understood I started setting up the matrices to do solve the linear equations. Also reading the Saunders and Shumaker (1984) paper is helpful. I will decribe below the way I set up the matrices and my understanding of how it works. You should be able to follow along using Carol write-up.

PDF papers on linearity:
GS5000-14_manual_2.pdf
Linearity of FISH-1.pdf
met8_2_009.pdf
saunders_shumaker_beamconjoiner_AO_23.pdf


BSG/RSG Table from Carols write-up page 2-3. Column 2 is the RD or S (mean of pixeles around max), column 3 is the φ from the matrix math, column 4 is the residual from Carols paper and Colum 5 is the ratio of φ / signal. Same for the RSG. Each of the columns contains the φ, Residual and ratio with and without the r² in the equations.

r coefficents with r²
BSG r values = [ -7.6534 2.2471e-007 ]
RSG r values = [ -7.099 3.4753e-007 ]

r coefficents without r²
BSG r values = [ 15.4471 ]
RSG r values = [ 28.9707 ]

BSG RSG
Aperature RD or S /%std φ (w r² / wo r²) Residual-Y (w r² / wo r²) Ratio (w r² / wo r²) Aperature RD or S / %std φ (w r² / wo r²) Residual-Y (w r² / wo r²) Ratio (w r² / wo r²)
A 36.796/ 7.621 30.994/ 47.710 1.851/ -4.533 0.842/ 1.297 A 35.988/ 5.635 30.769/ 56.870 1.880/ -8.089 0.855/ 1.580
IA 70.097/ 4.231 -1.853/ 4.533 IA 69.712/ 3.347 -1.884/ 8.089
I 34.195/ 8.448 29.598/ 42.368 3.056/ -7.274 0.866/ 1.239 I 34.517/ 6.106 29.961/ 49.901 2.542/ -13.587 0.868/ 1.446
IB 110.984/ 3.135 -1.211/ 2.740 IB 110.645/ 2.308 -0.671/ 5.498
B 77.209/ 4.002 72.524/ 86.803 2.967/ -5.853 0.939/ 1.124 B 77.308/ 3.060 72.917/ 95.212 2.706/ -11.066 0.943/ 1.232
JB 191.293/ 1.833 -1.781/ 3.113 JB 191.194/ 1.463 -2.073/ 5.568
J 113.909/ 2.721 109.343/ 123.050 3.084/ -6.306 0.960/ 1.080 J 113.156/ 1.999 109.117/ 130.520 3.056/ -11.606 0.964/ 1.153
JC 313.393/ 1.452 -1.369/ 3.193 JC 311.327/ 1.019 -1.085/ 6.038
C 199.997/ 1.586 195.050/ 208.983 2.697/ -6.461 0.975/ 1.045 C 198.660/ 1.371 194.060/ 215.816 2.485/ -11.815 0.977/ 1.086
KC 513.398/ 1.268 -1.508/ 3.268 KC 512.079/ 0.874 -1.678/ 5.776
K 314.101/ 1.421 309.247/ 323.130 2.777/ -6.418 0.985/ 1.029 K 313.581/ 1.013 309.333/ 331.010 2.817/ -11.542 0.986/ 1.056
KD 834.674/ 1.161 -1.745/ 3.150 KD 830.536/ 0.659 -1.869/ 5.765
D 520.518/ 1.278 516.185/ 530.141 3.260/ -5.824 0.992/ 1.018 D 515.962/ 0.733 512.474/ 534.262 3.518/ -10.671 0.993/ 1.035
LD 1347.366/ 0.964 -2.765/ 2.674 LD 1343.419/ 0.464 -3.568/ 4.906
L 825.333/ 1.221 821.170/ 835.345 3.338/ -5.434 0.995/ 1.012 L 824.946/ 0.626 820.906/ 843.035 2.823/ -10.882 0.995/ 1.022
LE 2192.315/ 0.978 -3.854/ 2.760 LE 2185.691/ 0.356 -4.303/ 5.976
E 1366.292/ 1.029 1360.717/1375.177 1.659/ -6.562 0.996/ 1.007 E 1360.003/ 0.475 1355.043/1377.602 1.496/ -11.372 0.996/ 1.013
ME 3587.785/ 0.978 -6.589/ 3.802 ME 3581.088/ 0.340 -10.712/ 5.396
M 2221.907/ 0.965 2215.719/2231.858 0.356/ -5.496 0.997/ 1.004 M 2220.851/ 0.403 2212.691/2237.852 -2.775/ -11.970 0.996/ 1.008
MF 5888.926/ 0.927 -17.357/ 1.694 MF 5872.737/ 0.287 -22.827/ 6.574
F 3666.225/ 0.956 3655.990/3674.209 -5.603/ -7.463 0.997/ 1.002 F 3653.968/ 0.361 3642.107/3670.430 -9.402/ -12.508 0.997/ 1.005
NF 9558.468/ 0.937 -39.728/ 5.769 NF 9554.364/ 0.271 -64.472/ 5.934
N 5891.186/ 0.931 5875.627/5905.474 -15.705/ -1.159 0.997/ 1.002 N 5889.815/ 0.316 5872.410/5918.839 -22.361/ 0.054 0.997/ 1.005
NG 15492.408/ 0.919 -109.095/ -4.610 NG 15486.570/ 0.263 -167.424/ -5.988
G 9605.580/ 0.939 9553.966/9597.771 -64.694/ -23.256 0.995/ 0.999 G 9584.196/ 0.266 9522.985/9590.714 -86.035/ -22.453 0.994/ 1.001
OG 25090.939/ 0.936 -258.485/ 27.866 OG 25136.470/ 0.239 -416.247/ 28.441
O 15488.946/ 0.936 15412.303/15536.481 -122.900/ 32.087 0.995/ 1.003 O 15514.664/ 0.258 15409.721/15603.168 -181.496/ 59.533 0.993/ 1.006
OH 39852.884/ 0.915 -723.174/ -59.954 OH 39980.108/ 0.240 -1119.704/ -87.974
H 24196.496/ 0.993 24066.654/24271.897 -253.751/ 59.954 0.995/ 1.003 H 24200.993/ 0.446 23999.075/24317.937 -398.361/ 87.974 0.992/ 1.005

Figure 1

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Figure 10

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pwd: G:\zflora\mldata\MOBY2\20120903_shadowing\Resonon\20130124_linearity
Date: 11-Feb-2013 14:02:03
Created from plt_linearity3_(1)